BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E03SP1|AL425870
(733 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1104 0.0
>3x_Contig1486
Length = 12131
Score = 1104 bits (544), Expect = 0.0
Identities = 672/725 (92%)
Strand = Plus / Minus
Query: 9 tatcctttcccaacagtttacttcacccagtctttttcatatattggttgtgcattcttt 68
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8541 tatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgcattcttt 8482
Query: 69 atathvvgsttttccmcttctgacatgtgcagtattccgccacacgtgatgacgatataa 128
|||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8481 atataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgacgatataa 8422
Query: 129 tcmtccccaatccatgagabanccagttggaatccctttmwvgcatgcagaacccmctct 188
| | || ||| ||||||| | ||||||||||||||||| ||||||||||||| ||||
Sbjct: 8421 taataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaacccactct 8362
Query: 189 ttatagasaggsgcgagcccccaatttacctmaccccttccgcgcccagttcgctcctat 248
||||||| ||| ||||| | |||||||||| || |||| |||| ||||||||||||||
Sbjct: 8361 ttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcgctcctat 8302
Query: 249 cctgcsagtsacgatggggacgtgctttcttcatgtatggsacgcttgctggcccttttt 308
||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8301 cctgcaagtaacgatgggaacgtgctttcttcatgtatggaacgcttgctggcccttttt 8242
Query: 309 tcaacctcgaaggaatagggtgctgaaaatagaagggaccctgtttttmagggaaaactg 368
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 8241 tcaacctcgaaggaatagggtgctgaaaatagaaggaaccctgtttttaagggaaaactg 8182
Query: 369 aatgasaagamaamsagamggtaactcgcagatgcatcttagtgccgccactatcagtca 428
||||| |||| || ||| ||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 8181 aatgaaaagaaaaaaagaaggtaactcgaagatgcatcttagtgccgccactataagtaa 8122
Query: 429 cccttttcatggagctccgcacaatacacctgacacaggccataagctcaatcgatccat 488
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 8121 cccttttcatggagctcagcacaatacacctgacacaggcaataagctcaatcgatcaat 8062
Query: 489 ttmttttccgasaccttgatctggatgcgaagcttctcaataattttgtaccttttcctt 548
|| |||| || |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8061 ttattttaagaaaccttgatctggatgcaaagcttctcaataattttgtaccttttcctt 8002
Query: 549 gtggttactatgatatcattttgcatcatttacgtctctgcctcattgcgattgaaaaat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8001 gtggttactatgatatcattttgcatcatttacgtctctgcctcattgcgattgaaaaat 7942
Query: 609 atttttttcgatttttgttatttaggaacaaagtgagtcgcaactaagaatcctacatca 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7941 atttttttcgatttttgttatttaggaacaaagtgagtcgcaactaagaatcctacatca 7882
Query: 669 cactatttcggtcagcttggattgaattagaatggtagatgtattttctaaacatatcaa 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7881 cactatttcggtcagcttggattgaattagaatggtagatgtattttctaaacatatcaa 7822
Query: 729 tcaca 733
|||||
Sbjct: 7821 tcaca 7817
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3741
Number of Sequences: 1807
Number of extensions: 3741
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 733
length of database: 10,358,551
effective HSP length: 16
effective length of query: 717
effective length of database: 10,329,639
effective search space: 7406351163
effective search space used: 7406351163
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)